Publications

Netha Ulahannan, Ronald Cutler, Reanna Dona-Termine, Claudia A. Simoes-Pires, N. Ari Wijetunga, Matthew McKnight Croken, Andrew D. Johnston, Yu Kong, Shahina B. Maqbool, Masako Suzuki, John M. Greally (2022). Genomic insights into host and parasite interactions during intracellular infection by Toxoplasma gondii. In: PLoS ONE, https://doi.org/10.1371/journal.pone.0275226.

Micah Belzberg, Martin Prince Alphonse, Isabelle Brown, Kyle A Williams, Raveena Khanna, Byron Ho, Shannon Wongvibulsin, Thomas Pritchard, Youkyung Sophie Roh, Nishadh Sutaria, Justin Choi, Jaroslaw Jedrych, Andrew D Johnston, Kakali Sarkar, Chirag Vasavda, Jimmy Meixiong, Carly Dillen, Kent Bondesgaard, John F Paolini, Wei Chen, David Corcoran, Nicolas Devos, Madan M Kwatra, Anna L Chien, Nathan K Archer, Luis A Garza, Xinzhong Dong, Sewon Kang, Shawn G Kwatra (2021). Prurigo Nodularis is Characterized by Systemic and Cutaneous Th22 Immune Polarization.. The Journal of Investigative Dermatology.

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Jui Choudhuri, Jamal Carter, Randin Nelson, Karin Skalina, Marika Osterbur-Badhey, Andrew D Johnston, Doctor Goldstein, Monika Paroder, James Szymanski (2020). SARS-CoV-2 PCR cycle threshold at hospital admission associated with patient mortality.. PloS one.

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Andrew D Johnston, Alali Abdulrazak, Hanae Sato, Shahina B Maqbool, John M Greally, Claudia A Simões-Pires (2020). A Cellular Stress Response Induced by the CRISPR-dCas9 Activation System Is Not Heritable Through Cell Divisions. The CRISPR Journal.

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Mondana H Ghias, Andrew D Johnston, Allison J Kutner, Robert G Micheletti, H Dean Hosgood, Steven R Cohen (2020). High-dose, high-frequency infliximab: A novel treatment paradigm for hidradenitis suppurativa.. Journal of the American Academy of Dermatology.

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Deepa Rastogi*, Andrew D Johnston*, John Nico, Lip Nam Loh, Yurydia Jorge, Masako Suzuki, Fernando Macian, John M Greally, *Co-first (2020). Functional Genomics of the Pediatric Obese Asthma Phenotype Reveal Enrichment of Rho-GTPase Pathways.. American Journal of Respiratory and Critical Care Medicine.

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Andrew D Johnston, Claudia A Simões-Pires, Taylor V Thompson, Masako Suzuki, John M Greally (2019). Functional genetic variants can mediate their regulatory effects through alteration of transcription factor binding.. Nature communications.

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Andrew D Johnston, Claudia A Simões-Pires, Masako Suzuki, John M Greally (2019). High-efficiency genomic editing in Epstein-Barr virus-transformed lymphoblastoid B cells using a single-stranded donor oligonucleotide strategy.. Communications Biology.

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Masako Suzuki, Will Liao, Frank Wos, Andrew D Johnston, Justin DeGrazia, Jennifer Ishii, Toby Bloom, Michael C Zody, Soren Germer, John M Greally (2018). Whole-genome bisulfite sequencing with improved accuracy and cost.. Genome Research.

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Deepa Rastogi, John Nico, Andrew D Johnston, Toni Adrianne M Tobias, Yurydia Jorge, Fernando Macian, John M Greally (2018). CDC42-related genes are upregulated in helper T~cells from obese asthmatic children.. The Journal of allergy and clinical immunology.

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N Ari Wijetunga, Andrew D Johnston, Ryo Maekawa, Fabien Delahaye, Netha Ulahannan, Kami Kim, John M Greally (2017). SMITE: an R/Bioconductor package that identifies network modules by integrating genomic and epigenomic information.. BMC bioinformatics.

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Emilio Lecona, Luis Alejandro Rojas, Roberto Bonasio, Andrew D Johnston, Oscar Fernández-Capetillo, Danny Reinberg (2013). Polycomb protein SCML2 regulates the cell cycle by binding and modulating CDK/CYCLIN/p21 complexes.. PLoS biology.

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